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ydhU/1 [2017-8-11 16:0:3]

similar to Mn catalase, inactive pseudogene in strain 168

locus

BSU05890

0.00

0.00 kDa

protein length

242 aa Sequence Blast

gene length

726 bp Sequence Blast

function

unknown

product

unknown

essential

synonyms

ydhU

Outlinks

KEGG BsubCyc SubtiList Expression Browser

Genomic Context

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categories

[category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.9|Resistance against oxidative and electrophile stress/ based on similarity]

[category|SW 6|Groups of genes] → [category|SW 6.10|Pseudogenes]

Gene

Coordinates

633,923 → 634,651

Phenotypes of a mutant

thsi is a pseudogene in ''B. subtilis'' 168

The protein

Protein family

manganese catalase family (according to Swiss-Prot)

Expression and Regulation

Operons

genes

[gene|BDDD52CE09533CFD6557B933F2AE1C9B94F9708B|ydhU/2]-[gene|F7C5C38298E1F1EF13A11332C92EA624D9381A3E|ydhU/1]

description

[pubmed|22383849]

regulatory mechanism

[protein|F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|Fur]: repression, in [regulon|F899F1EE27E6D503BCC06BC52E3C7FD80B8EF725|Fur regulon]

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Biological materials

Mutant

MGNA-C196 (ydhU::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2194 NBRP B. subtilis, Japan]

References

12354229