SubtiBank SubtiBank
yhjH [2019-08-28 10:16:14]
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yhjH [2019-08-28 10:16:14]

similar to transcriptional repressor ([SW|MarR family])
locus
BSU_10510
pI
7.39
mw
20.28 kDa
protein length
175 aa Sequence Blast
gene length
528 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    1,124,438 → 1,124,965

    The protein

    Protein family

  • [SW|MarR family]

    • Paralogous protein(s)

  • [protein|0D555F2AB7DC863E6FF388888308E980514DB719|PchR]

    • [SW|Localization]

  • cytoplasm (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|D07BD51E1DDEDA3CE292570AAEAE14C27C064A67|yhjG]-[gene|F5A59CE7727E0851652BB4C0144009154AB4978B|yhjH]
    description
    [Pubmed|22383849]
    view in new tab

    genes
    [gene|F5A59CE7727E0851652BB4C0144009154AB4978B|yhjH]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A722 (yhjH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/722 NBRP B. subtilis, Japan]
  • BKE10510 (Δ[gene|F5A59CE7727E0851652BB4C0144009154AB4978B|yhjH]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE10510 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGGGTTTTCCATCCTTT, downstream forward: _UP4_TAAAAAACACGCACTGCGGT
  • BKK10510 (Δ[gene|F5A59CE7727E0851652BB4C0144009154AB4978B|yhjH]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK10510 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGGGTTTTCCATCCTTT, downstream forward: _UP4_TAAAAAACACGCACTGCGGT