SubtiBank SubtiBank
yebC
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yebC

unknown
locus
BSU_06380
pI
9.57
mw
30.47 kDa
protein length
267 aa Sequence Blast
gene length
804 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    696,195 → 696,998

    The protein

    [SW|Localization]

  • cell membrane (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|F4D5BD29C034D22F6F44DA0A0C0A778441F8BDD2|yebC]
    description
    [Pubmed|21815947]

    sigma factors

  • [protein|081DF3EE9FA56209D648C7677188C61CE3AA8E41|SigM]: sigma factor, [Pubmed|18179421], in [regulon|081DF3EE9FA56209D648C7677188C61CE3AA8E41|SigM regulon]
  • [protein|D04629D798E458AD538809BB2B150B7FA81D2C7E|SigV]: sigma factor, in [regulon|D04629D798E458AD538809BB2B150B7FA81D2C7E|SigV regulon]

    • regulation

  • expression is reduced in a [protein|D04629D798E458AD538809BB2B150B7FA81D2C7E|SigV] mutant [Pubmed|21926231]

    • additional information

  • the mRNA is substantially stabilized upon depletion of [gene|872CCB5A49C9000BD95E4B0472556D5F60F7D7A4|RNase Y] [PubMed|21815947]
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    Biological materials

    Mutant

  • MGNA-A919 (yebC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/919 NBRP B. subtilis, Japan]
  • BKE06380 (Δ[gene|F4D5BD29C034D22F6F44DA0A0C0A778441F8BDD2|yebC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE06380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCAGCAACTCCTATCA, downstream forward: _UP4_TAATGAAAAAACCGGCTAAT
  • BKK06380 (Δ[gene|F4D5BD29C034D22F6F44DA0A0C0A778441F8BDD2|yebC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK06380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCAGCAACTCCTATCA, downstream forward: _UP4_TAATGAAAAAACCGGCTAAT

    • References

  • 21926231,21815947