SubtiBank SubtiBank
ywrE [2019-06-12 10:40:10]
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ywrE [2019-06-12 10:40:10]

unknown
locus
BSU36090
pI
8.75
mw
13.41 kDa
protein length
111 aa Sequence Blast
gene length
336 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,718,794 → 3,719,129

    Expression and Regulation

    Operons

    genes
    [gene|EC098261CA462610C864958EFEEFA830D6CDA96F|ywrE]
    description
    [Pubmed|9987136]

    sigma factors

  • [protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW]: sigma factor, [Pubmed|9987136,12207695], in [regulon|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW regulon]

    • regulation

  • induced by vancomycin ([protein|search|SigW]) [Pubmed|12207695]
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    Biological materials

    Mutant

  • MGNA-A581 (ywrE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/581 NBRP B. subtilis, Japan]
  • BKE36090 (Δ[gene|EC098261CA462610C864958EFEEFA830D6CDA96F|ywrE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE36090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCCAATTCCTCCTAATC, downstream forward: _UP4_ATTTATGTTTGTACCCTATA
  • BKK36090 (Δ[gene|EC098261CA462610C864958EFEEFA830D6CDA96F|ywrE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK36090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCCAATTCCTCCTAATC, downstream forward: _UP4_ATTTATGTTTGTACCCTATA

    • References

  • 9987136,12207695