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yopO
similar to transcription regulator (Xre family)
Genomic Context
categories
[category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity][category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]Gene
Coordinates
2,207,748 → 2,207,960
The protein
Protein family
[SW|Xre family][SW|Domains]
[SW|HTH cro/C1-type domain] (aa 5-59) (according to UniProt)Expression and Regulation
Operons
genes
[gene|8B15C7311E9791DC1FF29FF1A46ECC70E93FE2F4|yopM]-[gene|01BE35FB190DDC77BE19C013A8E0D980B132CBE1|yopN]-[gene|E1B90896149DBA399174478D412DCDC242AB1834|yopO]-[gene|30D16B0061BBE33B6B53F219A6654A40F2185C53|yopP]-[gene|25F9A95D40FD5FA1114A1938D6B0DE2368B8689E|yopQ]-[gene|7F82DED7C941BC501B6F810BF6541780AB87EDDD|yopR]
description
[Pubmed|22383849]
Biological materials
Mutant
BKE20820 (Δ[gene|E1B90896149DBA399174478D412DCDC242AB1834|yopO]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE20820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCAACCTCCTATTTTT, downstream forward: _UP4_TTAGATGAGAAAGGAGGAGABKK20820 (Δ[gene|E1B90896149DBA399174478D412DCDC242AB1834|yopO]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK20820 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTCAACCTCCTATTTTT, downstream forward: _UP4_TTAGATGAGAAAGGAGGAGAReferences
