SubtiBank SubtiBank
yrkR
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yrkR

unknown
locus
BSU_26410
pI
8.82
mw
16.38 kDa
protein length
139 aa Sequence Blast
gene length
417 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    2,702,688 → 2,703,104

    The protein

    Protein family

  • psiE family (single member, according to UniProt)

    • [SW|Localization]

  • cell membrane (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|1582F9E6510C4FA87B3A5F3F4A7F39008C654AA9|yrkP]-[gene|8A38FEFAA0FF91D989B77D40CBB3741902DC9D67|yrkQ]-[gene|E0DF6DE230AD0B632EEC0A1FB11EB32E59BD573E|yrkR]
    description
    [Pubmed|18175906]

    regulatory mechanism

  • [protein|1582F9E6510C4FA87B3A5F3F4A7F39008C654AA9|YrkP]: activation, [Pubmed|18175906], in [regulon|1582F9E6510C4FA87B3A5F3F4A7F39008C654AA9|YrkP regulon]
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    Biological materials

    Mutant

  • MGNA-C503 (yrkR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2501 NBRP B. subtilis, Japan]
  • BKE26410 (Δ[gene|E0DF6DE230AD0B632EEC0A1FB11EB32E59BD573E|yrkR]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE26410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATGTTGTCTCCTATTT, downstream forward: _UP4_TAATAAATTAGTTCGCATTA
  • BKK26410 (Δ[gene|E0DF6DE230AD0B632EEC0A1FB11EB32E59BD573E|yrkR]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK26410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATGTTGTCTCCTATTT, downstream forward: _UP4_TAATAAATTAGTTCGCATTA

    • References

  • 18175906