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ydaE [Tue Dec 13 2016 11:16:30 GMT+0100 (CET)]
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ydaE [Tue Dec 13 2016 11:16:30 GMT+0100 (CET)]

lyxose isomerase, general stress protein, survival of ethanol stress and low temperatures
locus
BSU04200
pI
4.88
mw
19.00 kDa
function
survival of ethanol stress and low temperatures
product
lyxose isomerase
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.28|Utilization of other pentoses and hexoses]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]

    • [SW|Categories] containing this gene/protein

  • [SW|general stress proteins (controlled by SigB)], [SW|Utilization of specific carbon sources]

    • This gene is a member of the following [SW|regulons]

  • [SW|SigB regulon]

    • Gene

    Coordinates on the chromosome (coding sequence)
    472,585 -> 473,088

    The protein

    Catalyzed reaction/ biological activity

  • D-lyxose = D-xylulose (according to Swiss-Prot)

    • Protein family

  • D-lyxose ketol-isomerase family (according to Swiss-Prot)

    • Structure

  • [PDB|2Y0O] [Pubmed|21520290]

    • Expression and Regulation

    Operon

  • ''[protein|search|ydaD]-[protein|search|ydaE]-[protein|search|ydaF]-[protein|search|ydaG]'' [Pubmed|10220166]

    • [SW|Sigma factor]

  • [protein|search|SigB] [Pubmed|15805528]

    • Regulation

  • induced by stress ([protein|search|SigB]) [Pubmed|15805528]
  • strongly induced in response to glucose starvation in M9 medium [Pubmed|23033921]

    • References

  • 10220166,15805528,23033921,21520290