SubtiBank SubtiBank
yqhS [2019-08-07 11:14:22]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yqhS [2019-08-07 11:14:22]

similar to 3-dehydroquinate dehydratase
locus
BSU_24470
pI
5.12
mw
16.29 kDa
protein length
148 aa Sequence Blast
gene length
447 bp Sequence Blast
function
unknown
product
unknown
essential
no
ec
4.2.1.10
synonyms

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]
  • Gene

    Coordinates
    2,539,755 → 2,540,201

    The protein

    Catalyzed reaction/ biological activity

  • 3-dehydroquinate = 3-dehydroshikimate + H2O (according to Swiss-Prot)
  • Protein family

  • type-II 3-dehydroquinase family (single member, according to UniProt)
  • Structure

  • [PDB|1GQO]
  • Expression and Regulation

    Operons

    genes
    [gene|449EEBF33F52B461F244331ACD140E68CF64EE7C|yqhR]-[gene|D7503C73C0BC2E411C651E409E91C2E22E8842E5|yqhS]-[gene|33886A1EAC13B684E92BF94201C46617AD2844B3|papA]-[gene|3054CD45713BBD69C2A528DE24AF6AF37175FD9D|efp]
    description
    [pubmed|22383849]
    view in new tab

    genes
    [gene|D7503C73C0BC2E411C651E409E91C2E22E8842E5|yqhS]-[gene|33886A1EAC13B684E92BF94201C46617AD2844B3|papA]-[gene|3054CD45713BBD69C2A528DE24AF6AF37175FD9D|efp]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-C465 (yqhS::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2463 NBRP B. subtilis, Japan]
  • CS214 (''[gene|D7503C73C0BC2E411C651E409E91C2E22E8842E5|yqhS]''::''aphA3'', available in [SW|Colin Harwood]'s and [SW|Jörg Stülke]'s labs) [Pubmed|27197833]
  • BKE24470 (Δ[gene|D7503C73C0BC2E411C651E409E91C2E22E8842E5|yqhS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE24470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACACAATCTCTCCTTTTCG, downstream forward: _UP4_AGCCAGCAAGGGGGAGAATC
  • BKK24470 (Δ[gene|D7503C73C0BC2E411C651E409E91C2E22E8842E5|yqhS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK24470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACACAATCTCTCCTTTTCG, downstream forward: _UP4_AGCCAGCAAGGGGGAGAATC
  • References

  • 27197833