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ykuR [Tue Dec 13 2016 11:16:32 GMT+0100 (CET)]
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ykuR [Tue Dec 13 2016 11:16:32 GMT+0100 (CET)]

N-acetyl-diaminopimelate deacetylase
locus
BSU14190
pI
5.10
mw
41.00 kDa
function
biosynthesis of lysine and peptidoglycan
product
N-acetyl-diaminopimelate deacetylase
essential
yes
ec
3.5.1.47
synonyms
dapL

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.1|Cell envelope and cell division] → [category|SW 1.1.1|Cell wall synthesis] → [category|SW 1.1.1.1|Biosynthesis of peptidoglycan]
  • [category|SW 2|Metabolism] → [category|SW 2.3|Amino acid/ nitrogen metabolism] → [category|SW 2.3.1|Biosynthesis/ acquisition of amino acids] → [category|SW 2.3.1.6|Biosynthesis/ acquisition of lysine/ threonine]
  • [category|SW 2|Metabolism] → [category|SW 2.6|Additional metabolic pathways] → [category|SW 2.6.1|Biosynthesis of cell wall components] → [category|SW 2.6.1.1|Biosynthesis of peptidoglycan]
  • [category|SW 6|Groups of genes] → [category|SW 6.1|Essential genes]
  • [SW|Categories] containing this gene/protein

  • [SW|cell wall synthesis], [SW|biosynthesis of cell wall components], [SW|biosynthesis/ acquisition of amino acids], [SW|essential genes]
  • Gene

    Coordinates on the chromosome (coding sequence)
    1,489,753 -> 1,490,877

    Phenotypes of a mutant

  • essential [Pubmed|24261876,12682299]
  • depletion of DapI results in swelling and rounding up of cells prior to lysis [Pubmed|24261876]
  • The protein

    Catalyzed reaction/ biological activity

  • N-acetyl-LL-2,6-diaminopimelate + H2O --> acetate + LL-2,6-diaminopimelate [Pubmed|24261876]
  • Protein family

  • peptidase M20A family (according to Swiss-Prot)
  • Paralogous protein(s)

  • [protein|search|SndA], [protein|search|SndB], [protein|search|SndC]
  • [SW|Localization]

  • forms uniformly distributed foci in the cytoplasm [Pubmed|24261876]
  • [SW|Interactions]

  • forms dimers [Pubmed|24261876]
  • [protein|search|DapI]-[protein|search|MreB] [Pubmed|24261876]
  • References

  • 24261876