SubtiBank SubtiBank
yybL [2017-12-02 18:46:26]
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yybL [2017-12-02 18:46:26]

similar to ABC transporter (permease)
locus
BSU40600
pI
9.81
mw
27.72 kDa
protein length
236 aa Sequence Blast
gene length
708 bp Sequence Blast
function
unknown
product
ABC transporter (permease)
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.2|Exporters] → [category|SW 1.2.1.2.6|Exporters of unknown function]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    4,174,410 → 4,175,120

    Expression and Regulation

    Operons

    genes
    [gene|5A68286ADFB1B334DC626612C74D03AE4DBAF0A7|yybN]-[gene|BA4CB875FD72C7E7767AFA44A5D8C32448F5E18C|yybM]-[gene|CE98D731B8D9BDBF4EB119346BB59F5E5C48C827|yybL]-[gene|8950AD10BE5B6EDA74C341D272201D1BA9DBAC85|yybK]-[gene|6260516A5ED4A49457997592F29CEC10B7A2CCA7|yybJ]
    description
    [pubmed|22383849]

    regulatory mechanism

  • [protein|1508770D5BCA5739D13E3ABD11CC5C103C07FF25|Rok]: repression, [protein|1508770D5BCA5739D13E3ABD11CC5C103C07FF25|Rok]-[protein|6740108089F13116F200C15F35C2E7561E990FEB|DnaA] [Pubmed|27902860,15743949], in [regulon|1508770D5BCA5739D13E3ABD11CC5C103C07FF25|Rok regulon]
  • [protein|6740108089F13116F200C15F35C2E7561E990FEB|DnaA]: repression, [protein|1508770D5BCA5739D13E3ABD11CC5C103C07FF25|Rok]-[protein|6740108089F13116F200C15F35C2E7561E990FEB|DnaA] [Pubmed|27902860,15743949], in [regulon|6740108089F13116F200C15F35C2E7561E990FEB|DnaA regulon]

    • regulation

  • repressed by [protein|1508770D5BCA5739D13E3ABD11CC5C103C07FF25|Rok]-[SW|DnaA] [Pubmed| 27902860,15743949]
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    Biological materials

    Mutant

  • MGNA-B842 (yybL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1841 NBRP B. subtilis, Japan]
  • BKE40600 (Δ[gene|CE98D731B8D9BDBF4EB119346BB59F5E5C48C827|yybL]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTTAATTTTCATTGTATTT, downstream forward: _UP4_AAATGAGGATTAAAGGCTTT
  • BKK40600 (Δ[gene|CE98D731B8D9BDBF4EB119346BB59F5E5C48C827|yybL]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTTTAATTTTCATTGTATTT, downstream forward: _UP4_AAATGAGGATTAAAGGCTTT

    • References

  • 10092453,23199363,15743949,27902860