SubtiBank SubtiBank
yopK [2019-01-23 16:03:29]
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yopK [2019-01-23 16:03:29]

unknown
locus
BSU20860
pI
5.86
mw
45.16 kDa
protein length
386 aa Sequence Blast
gene length
1158 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]
  • Gene

    Coordinates
    2,208,994 → 2,210,154

    The protein

    Structure

  • [PDB|5XYB] [Pubmed|30224798]
  • [PDB|5Y24] (complexed with signal peptide)[Pubmed|30224798]
  • [PDB|6IM4] (complexed with AimP [YopL|]) [Pubmed|30421358]
  • [PDB|6IPX] [Pubmed|30421358]
  • Biological materials

    Mutant

  • BKE20860 (Δ[gene|CAE7D8E45DA7CDE99D3EA114DF7E368A0A126389|aimR]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE20860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATTTCCCCTCATTTCT, downstream forward: _UP4_TAAAGGAGGTGAGACAATGA
  • BKK20860 (Δ[gene|CAE7D8E45DA7CDE99D3EA114DF7E368A0A126389|aimR]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK20860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTATTTCCCCTCATTTCT, downstream forward: _UP4_TAAAGGAGGTGAGACAATGA
  • References

    Research papers

  • 30224798,30421358