SubtiBank SubtiBank
yabS
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yabS

unknown
locus
BSU_00650
pI
4.72
mw
26.63 kDa
protein length
245 aa Sequence Blast
gene length
738 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]

    • Gene

    Coordinates
    73,106 → 73,843

    The protein

    [SW|Domains]

  • [SW|VWFA domain] (aa 1-91) (according to InterPro)

    • Structure

  • [PDB|3RAG] (from Alicyclobacillus acidocaldarius, 41% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|7C8DFE00A2B2B30CC8BEB35055D92CC2E4128F3A|spoIIE]-[gene|C8AA53889FC8B389E1D921B762BD78990C7A8E57|yabS]-[gene|E86A96B832351FF513DD9853EAD8998CC44C9951|yabT]-[gene|473F93EA5ADB78CD23C9C054B5D6B739078DDEEB|tilS]-[gene|B7BFC170EEC88DEC6CF932F80805D3F2C0BD3738|hprT]-[gene|4E7B9426CED372AA8A321A147116A3A589FBF20C|ftsH]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]: sigma factor, [Pubmed|16497325], in [regulon|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF regulon]

    • regulation

  • expressed early during sporulation in the forespore ([protein|CFF318EE6CACDEE763FBF96A2ABB46E944679AAA|SigF]) [Pubmed|16497325]
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    Biological materials

    Mutant

  • MGNA-B920 (yabS::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1919 NBRP B. subtilis, Japan]
  • BKE00650 (Δ[gene|C8AA53889FC8B389E1D921B762BD78990C7A8E57|yabS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE00650 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACATTCATTCCTCCTGGAG, downstream forward: _UP4_CGCTCAAGAAGGGGCATGCT
  • BKK00650 (Δ[gene|C8AA53889FC8B389E1D921B762BD78990C7A8E57|yabS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK00650 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACATTCATTCCTCCTGGAG, downstream forward: _UP4_CGCTCAAGAAGGGGCATGCT

    • References

    Research papers

  • 22383849