SubtiBank SubtiBank
uvrX
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uvrX

UV-damage repair protein
locus
BSU_21500
pI
9.63
mw
46.57 kDa
protein length
416 aa Sequence Blast
gene length
1251 bp Sequence Blast
function
DNA repair after UV damage
product
UV-damage repair protein
essential
no
synonyms
yolE
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.5|DNA repair/ recombination]
  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.5|DNA repair/ recombination] → [category|SW 3.1.5.6|Other proteins]
  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]

    • Gene

    Coordinates
    2,270,407 → 2,271,657

    The protein

    Protein family

  • [SW|DNA polymerase type-Y family] (according to UniProt)

    • Paralogous protein(s)

  • [protein|C87D33852F263A553CA747608E6200E4AD8344B5|PolY1], [protein|F0BC150F59730E64BA9AB3F979544EF6B5CC4E9E|PolY2]

    • [SW|Domains]

  • [SW|UmuC domain] (aa 12-196) (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|A9D5625FF5F1A3845FF6F8A290F647CCA73D39EF|yolD]-[gene|BE8D5E038C0FD748C0F9C3F18DCA601BFFE8EA52|uvrX]
    description
    [Pubmed|16267290]

    regulatory mechanism

  • [protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]: repression, [Pubmed|16267290], in [regulon|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA regulon]

    • regulation

  • induced by DNA damage ([protein|search|LexA]) [Pubmed|16267290]
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    Biological materials

    Mutant

  • BKE21500 (Δ[gene|BE8D5E038C0FD748C0F9C3F18DCA601BFFE8EA52|uvrX]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATCAATCATTGTATGTAAC, downstream forward: _UP4_TAAGATAAATTTAAACTTAT
  • BKK21500 (Δ[gene|BE8D5E038C0FD748C0F9C3F18DCA601BFFE8EA52|uvrX]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATCAATCATTGTATGTAAC, downstream forward: _UP4_TAAGATAAATTTAAACTTAT

    • References

  • 16267290,30916324