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yhdV [2017-12-29 13:35:09]
similar to flouride channel
function
export of flouride
product
putative flouride channel
Genomic Context
categories
[category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.11|Other exporters][category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.10|Resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)][category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]Gene
Coordinates
1,037,306 → 1,037,701
The protein
Protein family
crcB family (according to Swiss-Prot)Paralogous protein(s)
[protein|2F86A2FF36ED00DB0A9A91B064EBD095F5E759ED|FluC]Structure
[PDB|6B2A] (from E. coli, 35% identity, aa 6 ... 115) [pubmed|28952925][SW|Localization]
cell membrane (according to Swiss-Prot)Expression and Regulation
Operons
genes
[gene|04CACAF4F786090AB67D7C606C944F07B7A7FE55|yhdW]-[gene|BD1C4D9E6E8960DF77EE1571A637929C2D8C4A28|yhdV]-[gene|2F86A2FF36ED00DB0A9A91B064EBD095F5E759ED|fluC]
description
[Pubmed|22383849]
Biological materials
Mutant
MGNA-A699 (yhdV::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/699 NBRP B. subtilis, Japan]BKE09610 (Δ[gene|BD1C4D9E6E8960DF77EE1571A637929C2D8C4A28|yhdV]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09610 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAGCGCGCCTCCGATAAAAA, downstream forward: _UP4_CAAAGAAAGGGGCTGCAGGABKK09610 (Δ[gene|BD1C4D9E6E8960DF77EE1571A637929C2D8C4A28|yhdV]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09610 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAGCGCGCCTCCGATAAAAA, downstream forward: _UP4_CAAAGAAAGGGGCTGCAGGAReferences
