SubtiBank SubtiBank
ygaE [2019-06-07 09:27:42]
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ygaE [2019-06-07 09:27:42]

unknown
locus
BSU08700
pI
6.02
mw
40.58 kDa
protein length
353 aa Sequence Blast
gene length
1062 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    941,168 → 942,229

    The protein

    Protein family

  • UPF0421 family (according to Swiss-Prot)

    • [SW|Localization]

  • cell membrane (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|BB3716E24A7BE7C0108ABCFF9C9B67A0F15457AA|ygaE]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A250 (ygaE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/250 NBRP B. subtilis, Japan]
  • GP2184 (''[gene|BB3716E24A7BE7C0108ABCFF9C9B67A0F15457AA|ygaE]''::''spc''), available in [SW|Jörg Stülke]'s lab
  • BKE08700 (Δ[gene|BB3716E24A7BE7C0108ABCFF9C9B67A0F15457AA|ygaE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08700 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGGTTTGTGCGTGCATT, downstream forward: _UP4_TAACCCGGTTAAACAGCCGG
  • BKK08700 (Δ[gene|BB3716E24A7BE7C0108ABCFF9C9B67A0F15457AA|ygaE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08700 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGGTTTGTGCGTGCATT, downstream forward: _UP4_TAACCCGGTTAAACAGCCGG