SubtiBank SubtiBank
yybM
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yybM

unknown
locus
BSU_40590
pI
8.32
mw
28.97 kDa
protein length
251 aa Sequence Blast
gene length
756 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    4,173,665 → 4,174,420

    Expression and Regulation

    Operons

    genes
    [gene|5A68286ADFB1B334DC626612C74D03AE4DBAF0A7|yybN]-[gene|BA4CB875FD72C7E7767AFA44A5D8C32448F5E18C|yybM]-[gene|CE98D731B8D9BDBF4EB119346BB59F5E5C48C827|yybL]-[gene|8950AD10BE5B6EDA74C341D272201D1BA9DBAC85|yybK]-[gene|6260516A5ED4A49457997592F29CEC10B7A2CCA7|yybJ]
    description
    [pubmed|22383849]

    regulatory mechanism

  • [protein|1508770D5BCA5739D13E3ABD11CC5C103C07FF25|Rok]: repression, [protein|1508770D5BCA5739D13E3ABD11CC5C103C07FF25|Rok]-[protein|6740108089F13116F200C15F35C2E7561E990FEB|DnaA] [Pubmed|27902860,15743949], in [regulon|1508770D5BCA5739D13E3ABD11CC5C103C07FF25|Rok regulon]
  • [protein|6740108089F13116F200C15F35C2E7561E990FEB|DnaA]: repression, [protein|1508770D5BCA5739D13E3ABD11CC5C103C07FF25|Rok]-[protein|6740108089F13116F200C15F35C2E7561E990FEB|DnaA] [Pubmed|27902860,15743949], in [regulon|6740108089F13116F200C15F35C2E7561E990FEB|DnaA regulon]

    • regulation

  • repressed by [protein|1508770D5BCA5739D13E3ABD11CC5C103C07FF25|Rok]-[SW|DnaA] [Pubmed| 27902860,15743949]
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    Biological materials

    Mutant

  • MGNA-B841 (yybM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1840 NBRP B. subtilis, Japan]
  • BKE40590 (Δ[gene|BA4CB875FD72C7E7767AFA44A5D8C32448F5E18C|yybM]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40590 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTCTCACTCAATTCTT, downstream forward: _UP4_ACAATGAAAATTAAAAGACT
  • BKK40590 (Δ[gene|BA4CB875FD72C7E7767AFA44A5D8C32448F5E18C|yybM]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40590 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTCTCACTCAATTCTT, downstream forward: _UP4_ACAATGAAAATTAAAAGACT

    • References

  • 15743949,23199363,27902860