SubtiBank SubtiBank
ytqB [2019-01-30 12:48:33]
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ytqB [2019-01-30 12:48:33]

SAM-dependent class I methyltransferase
locus
BSU30490
pI
5.56
mw
21.14 kDa
protein length
194 aa Sequence Blast
gene length
585 bp Sequence Blast
function
unknown
product
SAM-dependent class I methyltransferase
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    3,120,964 → 3,121,548

    The protein

    [SW|Cofactors]

  • SAM [Pubmed|24637210]

    • Structure

  • [PDB|4PON], apoenzyme [Pubmed|24637210]
  • [PDB|4POO], complex with SAM [Pubmed|24637210]

    • Expression and Regulation

    Operons

    genes
    [gene|AB9762F1D388E27039FEFE946D8BE527CEF13F09|ytqA]-[gene|B7B3DF7FFA4144CBB12A72996C73CFBD7B6DD2D8|ytqB]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A165 (ytqB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/165 NBRP B. subtilis, Japan]
  • BKE30490 (Δ[gene|B7B3DF7FFA4144CBB12A72996C73CFBD7B6DD2D8|ytqB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTAAGGAAGAATTTTCTTCA, downstream forward: _UP4_GTCGCCATCGAAAAAAAAGC
  • BKK30490 (Δ[gene|B7B3DF7FFA4144CBB12A72996C73CFBD7B6DD2D8|ytqB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30490 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTAAGGAAGAATTTTCTTCA, downstream forward: _UP4_GTCGCCATCGAAAAAAAAGC

    • References

  • 24637210,24699744