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yvfR

similar to [SW|ABC transporter] (ATP-binding protein)

locus

BSU_34090

6.17

33.63 kDa

protein length

301 aa Sequence Blast

gene length

906 bp Sequence Blast

function

unknown

product

[SW|ABC transporter] (ATP-binding protein)

essential

synonyms

Outlinks

KEGG BsubCyc SubtiList UniProt Expression Browser

Genomic Context

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categories

[category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.2|Exporters] → [category|SW 1.2.1.2.6|Exporters of unknown function]

[category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates

3,498,352 → 3,499,257

The protein

Protein family

[SW|ABC transporter superfamily] (according to UniProt)

[SW|Domains]

[SW|ABC transporter domain] (aa 6-230) (according to UniProt)

Structure

[PDB|4YER] (from Thermotoga maritima, 32% identity)

[SW|Localization]

plasma membrane (according to UniProt)

Expression and Regulation

Operons

genes

[gene|B6BBB827CB475423FC9A781058141B7D05C4D284|yvfR]-[gene|72E387D5D44FA20D6EEFF1B39B6C9F322F966FC5|yvfS]

description

[Pubmed|26647299]

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Biological materials

Mutant

MGNA-A481 (yvfR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/481 NBRP B. subtilis, Japan]

BKE34090 (Δ[gene|B6BBB827CB475423FC9A781058141B7D05C4D284|yvfR]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACATGAGCACCTCCTGATC, downstream forward: _UP4_GACGGCAACAGGGAGGCGAT

BKK34090 (Δ[gene|B6BBB827CB475423FC9A781058141B7D05C4D284|yvfR]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACATGAGCACCTCCTGATC, downstream forward: _UP4_GACGGCAACAGGGAGGCGAT

References

10092453,26647299,28461449