SubtiBank SubtiBank
yqkF [2017-8-11 16:0:3]
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yqkF [2017-8-11 16:0:3]

NADPH-dependent 4-Hydroxy-2,3-trans-nonenal reductase
locus
BSU23620
pI
5.13
mw
34.56 kDa
protein length
306 aa Sequence Blast
gene length
918 bp Sequence Blast
function
unknown
product
NADPH-dependent 4-Hydroxy-2,3-trans-nonenal reductase
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    2,459,326 → 2,460,246

    The protein

    Protein family

  • aldo/keto reductase 2 family (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|F1AFFACD36C75702B0BB8F0B4241A9688FB6253C|IolS] (31,4%)

    • [SW|Cofactors]

  • NADPH [Pubmed|16242712]

    • Structure

  • [PDB|1YNP] (from ''B. halodurans'', 64% identity) [Pubmed|16242712]

    • Expression and Regulation

    Operons

    genes
    [gene|B0897643562CDB25547223CCB9CFD0F9E78710E2|yqkF]
    description
    (according to [http://dbtbs.hgc.jp/COG/prom/yqkF.html DBTBS]) null
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    genes
    [gene|703D69B351D8DBF9FE84113955DFF509819D0359|mciZ]-[gene|B0897643562CDB25547223CCB9CFD0F9E78710E2|yqkF]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [pubmed|18284588], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]

    • regulation

  • expressed early during sporulation in the mother cell ([protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]) [Pubmed|18284588]
  • strongly repressed in the presence of salt (1.2 M NaCl) [pubmed|32419322]
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