SubtiBank SubtiBank
lplA
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lplA

lipoprotein, putative [SW|ABC transporter] (solute binding protein)
locus
BSU_07100
pI
5.61
mw
56.05 kDa
protein length
502 aa Sequence Blast
gene length
1509 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.4|Unknown ABC transporters]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    779,529 781,037

    The protein

    Paralogous protein(s)

  • [protein|2D46E89AF6157B49BD443F47DB4A7258F22E8A24|YtcQ]

    • Structure

  • [PDB|3VLU] (from Sphingomonas sp., corresponds to aa 80 ... 379, 26% identity) [pubmed|22486720]

    • [SW|Localization]

  • associated to the membrane (via [protein|AA19541BCCAE08B48BD23F4E8337EBA220E5C4EF|LplB]-[protein|0A7FF3E2747598AE0EE39183E8827879C4B11A80|LplC]) [Pubmed|10092453]

    • Biological materials

    Mutant

  • BKE07100 ([gene|A4DA5C00BA37FF65E4190EC95B183ABAF1C9364D|lplA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE07100 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTGCGTAAGTCCCCCT, downstream forward: _UP4_TAAACCGATGCGCCTGCCTT
  • BKK07100 ([gene|A4DA5C00BA37FF65E4190EC95B183ABAF1C9364D|lplA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK07100 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTGCGTAAGTCCCCCT, downstream forward: _UP4_TAAACCGATGCGCCTGCCTT

    • References

  • 7921237,10092453,22486720