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ynzD [2018-02-10T12:45:29.000Z]
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ynzD [2018-02-10T12:45:29.000Z]

Spo0A-P phosphatase, control of the phosphorelay
locus
BSU17920
pI
6.33
mw
6.55 kDa
protein length
57 aa Sequence Blast
gene length
171 bp Sequence Blast
function
control of sporulation initiation
product
Spo0A-P phosphatase
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.7|phosphorelay] → [category|SW 3.4.7.5|Phosphatases controlling the phosphorelay]
  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.2|phosphorelay] → [category|SW 4.2.2.5|Phosphatases controlling the phosphorelay]

    • Gene

    Coordinates
    1,922,841 → 1,923,014

    The protein

    Protein family

  • spo0E family (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|A574974B6F4FF46DC69E03AE021651C67089866F|Spo0E]

    • Expression and Regulation

    Operons

    genes
    [gene|A2250786C40A23A5EBD830B3853DE5187B3D24EC|ynzD]
    description
    [Pubmed|9068642]

    regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]
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    Biological materials

    Mutant

  • BKE17920 (Δ[gene|A2250786C40A23A5EBD830B3853DE5187B3D24EC|ynzD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE17920 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAGGGATGTATCCTTTCA, downstream forward: _UP4_TGATTGCAAAATAAAAAACC
  • BKK17920 (Δ[gene|A2250786C40A23A5EBD830B3853DE5187B3D24EC|ynzD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK17920 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACAGGGATGTATCCTTTCA, downstream forward: _UP4_TGATTGCAAAATAAAAAACC

    • References

  • 9068642,11679073,20817675