SubtiBank SubtiBank
yxnB
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yxnB

unknown
locus
BSU_39910
pI
5.11
mw
18.90 kDa
protein length
160 aa Sequence Blast
gene length
483 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    4,098,423 4,098,905

    Expression and Regulation

    Operons

    genes
    [gene|787BB72119DB1321A8281D7C46FED28CAEDBC97C|yxbB]-[gene|88B01CC87394AEE693A98574F9343EBF99F0D60E|yxbA]-[gene|A15368CD02487EBC1AF999FED34672E38167BCB2|yxnB]
    description
    [Pubmed|20185509]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|20185509], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulatory mechanism

  • [protein|90ACE0DECA58D3C1A55E135120F7A0C1C920571C|CodY]: repression, [Pubmed|12618455], in [regulon|90ACE0DECA58D3C1A55E135120F7A0C1C920571C|CodY regulon]
  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|15101989], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

    • regulation

  • repressed by glucose (8-fold) [Pubmed|12850135]
    • view in new tab

    genes
    [gene|787BB72119DB1321A8281D7C46FED28CAEDBC97C|yxbB]-[gene|88B01CC87394AEE693A98574F9343EBF99F0D60E|yxbA]-[gene|A15368CD02487EBC1AF999FED34672E38167BCB2|yxnB]-[gene|9446D9C88CBBBC5A08495D8AA49A92A9F47F2C9B|asnH]-[gene|BF0E188249161B3CC24D223FDD48B820EBED8F55|yxaM]
    description
    [Pubmed|10746760]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|20185509], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulatory mechanism

  • [protein|90ACE0DECA58D3C1A55E135120F7A0C1C920571C|CodY]: repression, [Pubmed|12618455], in [regulon|90ACE0DECA58D3C1A55E135120F7A0C1C920571C|CodY regulon]
  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|15101989], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

    • regulation

  • repressed by glucose (8-fold) [Pubmed|12850135]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-B766 (yxnB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1765 NBRP B. subtilis, Japan]
  • BKE39910 ([gene|A15368CD02487EBC1AF999FED34672E38167BCB2|yxnB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE39910 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAGCACTTTTTGTTTTTCCA, downstream forward: _UP4_TAACGCTATTGGGAGGGAGA
  • BKK39910 ([gene|A15368CD02487EBC1AF999FED34672E38167BCB2|yxnB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK39910 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AAGCACTTTTTGTTTTTCCA, downstream forward: _UP4_TAACGCTATTGGGAGGGAGA

    • References

  • 10746760,12618455,10498721,20185509,12618455,15101989