SubtiBank SubtiBank
yrzB
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yrzB

unknown
locus
BSU_27380
pI
3.32
mw
10.68 kDa
protein length
gene length
282 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]
  • Gene

    Coordinates
    2,797,100 2,797,381

    The protein

    Protein family

  • UPF0473 family (single member, according to UniProt)
  • Expression and Regulation

    Operons

    genes
    [gene|C5457FEC46A1AFC6E5B1148B0E5F258B2C3197B2|reoM]-[gene|508FC7117B4CE7AF119B3830AE9DC113CB058039|yrrK]-[gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]
    description
    [pubmed|22383849]
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    genes
    [gene|8C5C7F9A585AE89D53EAF1DB3A9AB525B9E30B4A|alaS]-[gene|C5457FEC46A1AFC6E5B1148B0E5F258B2C3197B2|reoM]-[gene|508FC7117B4CE7AF119B3830AE9DC113CB058039|yrrK]-[gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]
    description
    [pubmed|22383849]

    regulatory mechanism

  • [regulon|T-box|T-box]: antitermination, in [regulon|T-box|T-box]
  • regulation

  • induced by alanine limitation ([regulon|T-box|T-box]) [Pubmed|19258532]
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    additional information

  • the mRNA belongs to the 46 most abundant mRNA species in dormant spores [pubmed|30782632]
  • Biological materials

    Mutant

  • MGNA-A855 (yrzB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/855 NBRP B. subtilis, Japan]
  • BKE27380 ([gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE27380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCTTCACCTCTGGCT, downstream forward: _UP4_TAAAACATCGCGCCAAACCA
  • BKK27380 ([gene|A0AA5289F5E92A4B2E18E4F3439F2D412208826E|yrzB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK27380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCTTCACCTCTGGCT, downstream forward: _UP4_TAAAACATCGCGCCAAACCA
  • References

    Research papers

  • 30782632