SubtiBank SubtiBank
yhcO
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yhcO

unknown
locus
BSU_09165
pI
5.43
mw
37.00 kDa
protein length
322 aa Sequence Blast
gene length
969 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]

    • Gene

    Coordinates
    989,712 990,680

    Expression and Regulation

    Operons

    genes
    [gene|9DF4E223C4BAC30D70DC8146DEE20F0FD821611B|yhcO]
    description
    [Pubmed|15383836]

    sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|15383836], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]
  • [protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|15699190,15383836], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]

    • regulation

  • expressed during sporulation [Pubmed|15699190,15383836]
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    additional information

  • the mRNA belongs to the 46 most abundant mRNA species in dormant spores [pubmed|30782632]

    • Biological materials

    Mutant

  • MGNA-A678 (yhcO::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/678 NBRP B. subtilis, Japan]
  • BKE09165 ([gene|9DF4E223C4BAC30D70DC8146DEE20F0FD821611B|yhcO]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09165 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAACGTCTCCCTCCCTGAG, downstream forward: _UP4_GTTATTAGTGAAGTCCTTGC
  • BKK09165 ([gene|9DF4E223C4BAC30D70DC8146DEE20F0FD821611B|yhcO]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09165 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAACGTCTCCCTCCCTGAG, downstream forward: _UP4_GTTATTAGTGAAGTCCTTGC

    • References

  • 15699190,15383836,30782632