ABC transporter (hydrophobic protein, probably channel protein)
product
ABC transporter
(hydrophobic protein, probably channel protein)
Genomic Context
categories
[category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.4|Unknown ABC transporters][category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.5|Cold stress proteins][category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins][SW|Categories] containing this gene/protein
[SW|ABC transporters], [SW|cold stress proteins], [SW|membrane proteins]This gene is a member of the following [SW|regulons]
[SW|YtrA regulon]Gene
Coordinates on the chromosome (coding sequence)
3,115,989 -> 3,116,966
The protein
Protein family
ABC-5 integral membrane protein family (according to Swiss-Prot)Paralogous protein(s)
[protein|search|YtrC][SW|Localization]
cell membrane (according to Swiss-Prot)[SW|Interactions]
([protein|search|YtrB]-[protein|search|YtrE])-([protein|search|YtrC]-[protein|search|YtrD])-[protein|search|YtrF] [Pubmed|10986249]Expression and Regulation
Operon
''[protein|search|ytrG]-[protein|search|ytrA]-[protein|search|ytrB]-[protein|search|ytrC]-[protein|search|ytrD]-[protein|search|ytrE]-[protein|search|ytrF]'' [Pubmed|10986249,21856850][SW|Sigma factor]
[protein|search|SigA] [Pubmed|10986249]Regulation
induced by ramoplanin ([protein|search|YtrA]) [Pubmed|21856850]expressed early in the stationary phase [Pubmed|10986249]induced by cold shock (5-fold) [Pubmed|12399512]Regulatory mechanism
[protein|search|YtrA]: transcription repression [Pubmed|10986249,21856850]References
10986249,10092453,12399512 
