SubtiBank SubtiBank
ytnM
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ytnM

unknown
locus
BSU_29280
pI
10.15
mw
31.64 kDa
protein length
300 aa Sequence Blast
gene length
903 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.12|Other transporters]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    2,998,796 2,999,698

    The protein

    Protein family

  • [SW|4-toluene sulfonate uptake permease (TSUP) (TC 2.A.102) family] (according to UniProt)

    • [SW|Localization]

  • membrane (Heterogeneous) [Pubmed|16479537]

    • Expression and Regulation

    Operons

    genes
    [gene|E3F1B3A4086DBC40FD9AE9CD6981270FBDFA6CAF|snaA]-[gene|A6A13C54177381CE78ABA2CFC2A3F2CE12099F15|tcyJ]-[gene|A8FA40EACDB15CF53DDDA725A3AA5A6EB654FA8B|tcyK]-[gene|350C97E4A4C60A6E2FF9610D50B4A49FB9F9B42D|tcyL]-[gene|B1DD32A3B3D1C0C5391A40834940257357A2F30F|tcyM]-[gene|B24763A732111026D21C828FF9BE73FB22A123CF|tcyN]-[gene|EDC3565D90D7059A4A4C66A13EB568420F6CECD4|cmoO]-[gene|FCD25CA4414D689B217F54B0C44EB805F9590454|cmoI]-[gene|8145952307BC47805A7A9BD39418474358043BFE|cmoJ]-[gene|3D32B6C1DC9CAC615B02E14EA846648C3B0E61D6|ribR]-[gene|0DE66A10D9475DC57A140561E8532D3EC038FD6F|sndA]-[gene|910EAAF48C85D0364751EC9585121246AF677431|ytnM]
    description
    [Pubmed|15668000]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|15272571], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulatory mechanism

  • [protein|50930C56C27D22715620A350220E3C56ADB41020|CymR]: repression, [Pubmed|16109943], in [regulon|50930C56C27D22715620A350220E3C56ADB41020|CymR regulon]
  • [protein|741156D495BE3857683C8A0390764EAD83845ABC|AscR]: activation, [Pubmed|16109943], in [regulon|741156D495BE3857683C8A0390764EAD83845ABC|AscR regulon]

    • regulation

  • induced in the presence of methionine and taurine [Pubmed|11390694]
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    Biological materials

    Mutant

  • MGNA-A153 (ytnM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/153 NBRP B. subtilis, Japan]
  • BKE29280 ([gene|910EAAF48C85D0364751EC9585121246AF677431|ytnM]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29280 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CTTCATCAGAACACCCCATC, downstream forward: _UP4_TAAAGGTTTTTCCGCTTTAC
  • BKK29280 ([gene|910EAAF48C85D0364751EC9585121246AF677431|ytnM]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29280 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CTTCATCAGAACACCCCATC, downstream forward: _UP4_TAAAGGTTTTTCCGCTTTAC

    • References

  • 16109943,15668000,16479537,23944997