SubtiBank SubtiBank
yacO [Tue Dec 13 2016 11:16:30 GMT+0100 (CET)]
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yacO [Tue Dec 13 2016 11:16:30 GMT+0100 (CET)]

putative 23S rRNA methyltransferase
locus
BSU00960
pI
8.00
mw
27.00 kDa
function
unknown
product
putative 23S rRNA methyltransferase
essential
no
ec
2.1.1.-
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.2|rRNA modification and maturation]

    • [SW|Categories] containing this gene/protein

  • [SW|translation]

    • This gene is a member of the following [SW|regulons]

  • [SW|T-box]

    • Gene

    Coordinates on the chromosome (coding sequence)
    115,269 -> 116,018

    The protein

    Protein family

  • RNA methyltransferase trmH family (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|search|YsgA]

    • Structure

  • [PDB|1GZ0] (from ''E. coli'', 44% identity) [Pubmed|12377117]

    • Expression and Regulation

    Operon

  • ''[protein|search|gltX]-[protein|search|cysE]-[protein|search|cysS]-[protein|search|mrnC]-[protein|search|yacO]-[protein|search|yacP]'' [Pubmed|7510287]

    • [SW|Sigma factor]

  • [protein|search|SigA] [Pubmed|7510287]

    • Regulation

  • repression by cysteine ([protein|search|T-box]) [Pubmed|7510287]

    • Regulatory mechanism

  • [protein|search|T-box], overlaps a transcription terminator upstream of ''[protein|search|cysE]'': transcription antitermination [Pubmed|7510287]

    • References

  • 19258532,7510287,12377117