SubtiBank SubtiBank
yxzE
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yxzE

unknown
locus
BSU_38790
pI
5.10
mw
6.70 kDa
protein length
66 aa Sequence Blast
gene length
201 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]

    • Gene

    Coordinates
    3,982,973 3,983,173

    Expression and Regulation

    Operons

    genes
    [gene|8C8DFC3CE03F8F3EE38376D42DD0D29ACE105A06|yxzE]
    description
    [Pubmed|9987136]

    sigma factors

  • [protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW]: sigma factor, [Pubmed|9987136], in [regulon|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW regulon]

    • regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|12076816], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

    • regulation

  • repressed during logrithmic growth ([protein|search|AbrB]) [Pubmed|12076816]

    • additional information

  • the mRNA is very stable (half-life > 15 min) [http://www.ncbi.nlm.nih.gov/sites/entrez/12884008 PubMed]
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    Biological materials

    Mutant

  • BKE38790 ([gene|8C8DFC3CE03F8F3EE38376D42DD0D29ACE105A06|yxzE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE38790 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTTCGCGTCACTCCCTTT, downstream forward: _UP4_GGCGGCGATTAAACGCCGCC
  • BKK38790 ([gene|8C8DFC3CE03F8F3EE38376D42DD0D29ACE105A06|yxzE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK38790 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTTCGCGTCACTCCCTTT, downstream forward: _UP4_GGCGGCGATTAAACGCCGCC

    • References

  • 12884008,9987136,12076816