SubtiBank SubtiBank
ytkL
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ytkL

general stress protein
locus
BSU_29410
pI
5.01
mw
24.68 kDa
protein length
227 aa Sequence Blast
gene length
684 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]

    • Gene

    Coordinates
    3,009,915 3,010,598

    The protein

    Protein family

  • UPF0173 family (with [protein|888BC7D4C610DEBA6D46638F5FA1E86C1D433F48|YddR], according to UniProt)

    • Structure

  • [PDB|3X2Z] (from Thermotoga maritima, 49% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|3BF3EC6B3139744D968B2FF18CBEEEF15B591AFF|ytkK]-[gene|8B28AA1A88FA56C9F4742F668B28F3323715D948|ytkL]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

    • regulation

  • induced by stress ([protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]) [Pubmed|15805528]
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    Biological materials

    Mutant

  • MGNA-A157 (ytkL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/157 NBRP B. subtilis, Japan]
  • BKE29410 ([gene|8B28AA1A88FA56C9F4742F668B28F3323715D948|ytkL]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCTTTCACCTCGTCAC, downstream forward: _UP4_TAAACCGTGAAACCATCTCC
  • BKK29410 ([gene|8B28AA1A88FA56C9F4742F668B28F3323715D948|ytkL]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCTTTCACCTCGTCAC, downstream forward: _UP4_TAAACCGTGAAACCATCTCC

    • References

  • 15805528,9387221