SubtiBank SubtiBank
yitO [2019-10-18 09:13:23]
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yitO [2019-10-18 09:13:23]

unknown
locus
BSU_11055
pI
9.00
mw
35.00 kDa
protein length
309 aa Sequence Blast
gene length
930 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    1,183,029 1,183,958

    The protein

    Paralogous protein(s)

  • [protein|073D63E17C8248BE39F331FDE9902E21A34056D5|SdpB]

    • [SW|Localization]

  • cell membrane (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|FBA412B070CE4FFE554F2657E0F745EF5C853B8A|yitP]-[gene|81E929FD7F66A996300C8412BE172883C262BD67|yitO]-[gene|330CB6A25181F7AFD3C63F73CA21A3428882D100|yitM]
    description
    [Pubmed|17850253]

    regulatory mechanism

  • [protein|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU]: activation, [pubmed|17850253], in [regulon|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU regulon]

    • regulation

  • induced in biofilms ([SW|DegU]) [Pubmed|17850253]
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    Biological materials

    Mutant

  • BKE11055 ([gene|81E929FD7F66A996300C8412BE172883C262BD67|yitO]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE11055 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTCCCATCTGGTGATGGTCT, downstream forward: _UP4_CACAAGAAGGGAGAGGTTTC
  • BKK11055 ([gene|81E929FD7F66A996300C8412BE172883C262BD67|yitO]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK11055 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GTCCCATCTGGTGATGGTCT, downstream forward: _UP4_CACAAGAAGGGAGAGGTTTC

    • References

  • 27766092,31622331