SubtiBank SubtiBank
ywkD
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ywkD

unknown
locus
BSU_37020
pI
5.41
mw
14.69 kDa
protein length
128 aa Sequence Blast
gene length
387 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    3,798,281 3,798,667

    The protein

    [SW|Domains]

  • [SW|VOC domain] (aa 5-128) (according to UniProt)

    • Structure

  • [PDB|2P25] (from Enterococcus faecalis, 54% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|81CCDC33856F2F8BC59BCC7FED34015340D21C48|ywkD]-[gene|09E9194E82DF199527F414DB0EC15547A71AD25E|racA]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B654 (ywkD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1653 NBRP B. subtilis, Japan]
  • BKE37020 ([gene|81CCDC33856F2F8BC59BCC7FED34015340D21C48|ywkD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE37020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATCCCTCCTCGAATTC, downstream forward: _UP4_TAACAGTTTTTGAAGAAAAA
  • BKK37020 ([gene|81CCDC33856F2F8BC59BCC7FED34015340D21C48|ywkD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK37020 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATCCCTCCTCGAATTC, downstream forward: _UP4_TAACAGTTTTTGAAGAAAAA