SubtiBank SubtiBank
lytC [Thu Aug 25 2016 18:20:24 GMT+0200 (CEST)]
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

lytC [Thu Aug 25 2016 18:20:24 GMT+0200 (CEST)]

N-acetylmuramoyl-L-alanine amidase, required for flagellar function
locus
BSU35620
pI
10.00
mw
52.00 kDa
function
major autolysin, cell separation, wall turnover
product
N-acetylmuramoyl-L-alanine amidase
essential
no
ec
3.5.1.28
synonyms
cwlB

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.1|Cell envelope and cell division] → [category|SW 1.1.3|Cell wall degradation/ turnover] → [category|SW 1.1.3.1|Autolysis]
  • [category|SW 4|Lifestyles] → [category|SW 4.1|Exponential and early post-exponential lifestyles] → [category|SW 4.1.1|Motility and chemotaxis] → [category|SW 4.1.1.4|Motility and chemotaxis/ other]
  • [SW|Categories] containing this gene/protein

  • [SW|cell wall degradation/ turnover], [SW|motility and chemotaxis]
  • This gene is a member of the following [SW|regulons]

  • [SW|SigD regulon], [SW|SlrR regulon], [SW|YvrHb regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    3,659,119 -> 3,660,609

    Phenotypes of a mutant

  • impaired in motility, the phenotype is suppressed by mutations in ''[protein|search|lonA]'' or ''[protein|search|smiA]'' [Pubmed|19542270]
  • The protein

    Catalyzed reaction/ biological activity

  • Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides (according to Swiss-Prot)
  • Protein family

  • N-acetylmuramoyl-L-alanine amidase 3 family (according to Swiss-Prot)
  • [SW|Domains]

  • contains an amidase_3 domain (like [protein|search|CwlC], [protein|search|CwlD], [protein|search|YqiI], [protein|search|YrvJ])
  • [SW|Localization]

  • secreted (according to Swiss-Prot)
  • Expression and Regulation

    Operon

  • ''[protein|search|lytA]-[protein|search|lytB]-[protein|search|lytC]'' [Pubmed|1357079]
  • [SW|Sigma factor]

  • [protein|search|SigA] [Pubmed|1357079], [protein|search|SigD] [Pubmed|1357079]
  • Regulatory mechanism

  • [SW|YvrHb]: transcription repression [Pubmed|16306698]
  • [protein|search|SlrR] (in complex with [protein|search|SinR]: transcription repression [Pubmed|20351052]
  • Biological materials

    Mutant

  • 1A789 ( ''lytC''::''kan''), [Pubmed|1588906], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A789&Search=1A789 BGSC]
  • References

  • 19542270,10945275,14594841,1357079,16306698,20351052,9158733,27118079