SubtiBank SubtiBank
ydaC
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ydaC

similar to N-methyltransferase
locus
BSU_04180
pI
9.76
mw
19.95 kDa
protein length
181 aa Sequence Blast
gene length
546 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    470,957 471,502

    The protein

    Protein family

  • [SW|Methyltransferase superfamily] (according to UniProt)

    • Structure

  • [PDB|4INE] (N-methyltransferase from Caenorhabditis elegans 31% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|671180A1D267729FF59C449B8FDFA9E1990D9F67|ydaC]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|26577401], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]
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    Biological materials

    Mutant

  • MGNA-C085 (ydaC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2083 NBRP B. subtilis, Japan]
  • BKE04180 ([gene|671180A1D267729FF59C449B8FDFA9E1990D9F67|ydaC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE04180 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCCGATGACGCCCTTTG, downstream forward: _UP4_ACATAAAGTGGACGGGCTTC
  • BKK04180 ([gene|671180A1D267729FF59C449B8FDFA9E1990D9F67|ydaC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK04180 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGCCGATGACGCCCTTTG, downstream forward: _UP4_ACATAAAGTGGACGGGCTTC

    • References

  • 26577401