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yneB [2019-09-05 09:55:22]
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yneB [2019-09-05 09:55:22]

similar to resolvase
locus
BSU_17870
pI
6.64
mw
24.59 kDa
protein length
217 aa Sequence Blast
gene length
654 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.6|DNA repair/ recombination/ based on similarity]

    • Gene

    Coordinates
    1,918,742 1,919,395

    Phenotypes of a mutant

  • increased sensitivity to DNA-damaging agents [Pubmed|23728628]

    • The protein

    Protein family

  • [SW|site-specific recombinase resolvase family] (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|7BF591DCDC9635C605D76135481A8A9DB63EE861|yneA]-[gene|67074435B8FDA85C8ED4D8C4ECE3580C4EDFBF2A|yneB]-[gene|5BFD552F8A467C8D95FABE87CC8C5E7F04114886|ynzC]
    description
    [Pubmed|12581363]

    regulatory mechanism

  • [protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]: repression, [Pubmed|12581363], in [regulon|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA regulon]

    • regulation

  • induced by DNA damage ([protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]) [Pubmed|12581363]

    • additional information

  • YneA is rapidly degraded by extracellular proteases ([protein|5ED8301B9681FDD5171A9344A971E891493A6558|CtpA]) [PubMed|29979679,20400548]
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    Biological materials

    Mutant

  • BKE17870 ([gene|67074435B8FDA85C8ED4D8C4ECE3580C4EDFBF2A|yneB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE17870 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTATCTCTCTTTCCTC, downstream forward: _UP4_TGAATCAGTTGTAAAACTTT
  • BKK17870 ([gene|67074435B8FDA85C8ED4D8C4ECE3580C4EDFBF2A|yneB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK17870 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTATCTCTCTTTCCTC, downstream forward: _UP4_TGAATCAGTTGTAAAACTTT

    • References

  • 12581363,16267290,23728628