SubtiBank SubtiBank
yxjI
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yxjI

unknown
locus
BSU_38940
pI
4.47
mw
18.68 kDa
protein length
162 aa Sequence Blast
gene length
489 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]

    • Gene

    Coordinates
    3,997,221 3,997,709

    The protein

    Protein family

  • LOR family (single member, according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|660443DFA2D175758677E4F88A2CEEC3BB5A2399|yxjI]
    description
    [Pubmed|9987136]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]
  • [protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW]: sigma factor, [Pubmed|9987136], in [regulon|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW regulon]

    • regulatory mechanism

  • [protein|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU]: repression, in [regulon|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU regulon]

    • regulation

  • induced by stress ([protein|search|SigB]) [Pubmed|15805528]
    • view in new tab

    genes
    [gene|F4C0A4050414B2FC9D6E571419D9537707DA4C05|yxjJ]-[gene|660443DFA2D175758677E4F88A2CEEC3BB5A2399|yxjI]
    description
    [Pubmed|10746760]

    sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

    • regulatory mechanism

  • [protein|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU]: repression, in [regulon|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU regulon]

    • regulation

  • induced by stress ([protein|search|SigB]) [Pubmed|15805528]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-B799 (yxjI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1798 NBRP B. subtilis, Japan]
  • BKE38940 ([gene|660443DFA2D175758677E4F88A2CEEC3BB5A2399|yxjI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE38940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGCTGAAGTCTCCTTTG, downstream forward: _UP4_TAAAAAGCATTGACAATTGA
  • BKK38940 ([gene|660443DFA2D175758677E4F88A2CEEC3BB5A2399|yxjI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK38940 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTGCTGAAGTCTCCTTTG, downstream forward: _UP4_TAAAAAGCATTGACAATTGA

    • References

  • 16672620,15805528