SubtiBank SubtiBank
yodH
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yodH

similar to methyltransferase
locus
BSU_19600
pI
5.11
mw
25.92 kDa
protein length
233 aa Sequence Blast
gene length
702 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]

    • Gene

    Coordinates
    2,133,455 2,134,156

    The protein

    Protein family

  • [SW|Methyltransferase superfamily] (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|65F2152BF78AEC10E921D46E62D472B7FA74FA3A|yodH]-[gene|4D3BF0A60B7FBF7CC8C97F8AEF5B3F2A2D41979C|yodI]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|15699190,15383836], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]

    • regulation

  • expressed late during sporulation in the mother cell ([protein|search|SigK]) [Pubmed|15699190,15383836]
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    Biological materials

    Mutant

  • MGNA-B438 (yodH::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1437 NBRP B. subtilis, Japan]
  • BKE19600 ([gene|65F2152BF78AEC10E921D46E62D472B7FA74FA3A|yodH]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE19600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATATCGAATCCTCCTTTT, downstream forward: _UP4_TAAAACGGCGTATCGCCCCC
  • BKK19600 ([gene|65F2152BF78AEC10E921D46E62D472B7FA74FA3A|yodH]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK19600 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATATCGAATCCTCCTTTT, downstream forward: _UP4_TAAAACGGCGTATCGCCCCC

    • References

  • 15699190,15383836