SubtiBank SubtiBank
rpoY [2017-8-11 16:0:3]
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rpoY [2017-8-11 16:0:3]

epsilon subunit of RNA polymerase
locus
BSU14540
pI
4.61
mw
8.12 kDa
protein length
69 aa Sequence Blast
gene length
207 bp Sequence Blast
function
control of RNA polymerase activity
product
epsilon subunit of RNA polymerase
essential
no
synonyms
ykzG
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.2|RNA synthesis and degradation] → [category|SW 3.2.1|Transcription] → [category|SW 3.2.1.1|RNA polymerase]

    • Gene

    Coordinates
    1,524,791 → 1,525,000

    The protein

    Protein family

  • UPF0356 family (according to Swiss-Prot)

    • Structure

  • [PDB|4NJC] [Pubmed|25092033]

    • [SW|Localization]

  • colocalizes with the nucleoid [Pubmed|25092033]

    • Expression and Regulation

    Operons

    genes
    [gene|5F41273FB867C688011738CD45AA6FF5D3987EFE|rpoY]-[gene|3EB289D0F58A58C693AB588798EE66A731341999|rnjA]
    description
    [Pubmed|24187087]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|24187087], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]
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    Biological materials

    Expression vector

  • pGP2824: expression in ''B. subtilis'', with C-terminal Strep-tag, in [SW|pGP382], available in [SW|Jörg Stülke]' lab

    • lacZ fusion

  • pGP420 (in [protein|search|pAC7]), available in [SW|Stülke] lab

    • References

    Reviews

  • 25878038

    • Original publications

  • 24187087,20724389,25092033