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ygzD

similar to transcription regulator ([SW|Xre family])

locus

BSU_08899

7.83

7.60 kDa

protein length

66 aa Sequence Blast

gene length

201 bp Sequence Blast

function

unknown

product

putative HTH-type transcriptional regulator

essential

synonyms

Outlinks

KEGG BsubCyc UniProt Expression Browser

Genomic Context

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categories

[category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

Gene

Coordinates

966,671 966,871

The protein

Protein family

[SW|Xre family]

[SW|Domains]

[SW|HTH cro/C1-type domain] (aa 5-59) (according to UniProt)

Structure

[PDB|1UTX] (from Enterococcus faecalis, 41% identity) [pubmed|15359276]

Expression and Regulation

Operons

genes

[gene|5DB65F7EE4EFADFB0B46C2EE5726D4B9FA9D85E9|ygzD]-[gene|FFC5766E471A155D3C5C0DB3A9DA46BE24781965|ygaO]

description

[pubmed|22383849]

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Biological materials

Mutant

BKE08899 ([gene|5DB65F7EE4EFADFB0B46C2EE5726D4B9FA9D85E9|ygzD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08899 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATGACGTCTGTCCCCT, downstream forward: _UP4_TTTTGGTTAGAGGAGGAAAA

BKK08899 ([gene|5DB65F7EE4EFADFB0B46C2EE5726D4B9FA9D85E9|ygzD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08899 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCATGACGTCTGTCCCCT, downstream forward: _UP4_TTTTGGTTAGAGGAGGAAAA

References

23504016,15359276