SubtiBank SubtiBank
ykjA
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ykjA

unknown
locus
BSU_13060
pI
6.20
mw
27.56 kDa
protein length
243 aa Sequence Blast
gene length
732 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    1,374,437 1,375,168

    The protein

    Protein family

  • [SW|UPF0702 family] (according to UniProt)

    • Structure

  • [PDB|3C6F] ([protein|EBD0F966FD7B3662814D530064BD307561A5CB15|YetF], corresponds to aa 109 ... 224, 31% identity)

    • [SW|Localization]

  • cell membrane (according to UniProt)
  • cytoplasm (Homogeneous) [Pubmed|16479537]

    • Expression and Regulation

    Operons

    genes
    [gene|E272A68088B689873CE3269CFDD2DD830F3AB3E4|hmp]-[gene|5688E6CB20A55856F4A4D893CED3D54BA21209AE|ykjA]
    description
    [Pubmed|22383849]

    regulation

  • expressed under anaerobic conditions ([protein|search|ResD]) [Pubmed|10972836]
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    Biological materials

    Mutant

  • MGNA-A745 (ykjA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/745 NBRP B. subtilis, Japan]
  • BKE13060 ([gene|5688E6CB20A55856F4A4D893CED3D54BA21209AE|ykjA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACCGATCTTTACCTCCATC, downstream forward: _UP4_TAAGATGGCTCTCTCTTGTA
  • BKK13060 ([gene|5688E6CB20A55856F4A4D893CED3D54BA21209AE|ykjA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACCGATCTTTACCTCCATC, downstream forward: _UP4_TAAGATGGCTCTCTCTTGTA

    • References

  • 16479537,22383849