SubtiBank SubtiBank
yhaZ
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yhaZ

similar to alkyl purine DNA glycosylase
locus
BSU_09810
pI
9.08
mw
41.65 kDa
protein length
357 aa Sequence Blast
gene length
1074 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.6|DNA repair/ recombination/ based on similarity]

    • Gene

    Coordinates
    1,055,143 1,056,216

    The protein

    Structure

  • [PDB|5VHV] (from Pseudomonas flourescens, 41% identity) [pubmed|29054852]

    • Expression and Regulation

    Operons

    genes
    [gene|4873DC24E73F5677AF5C4947B21199904C3EB394|yhaZ]
    description
    [Pubmed|16267290]

    regulatory mechanism

  • [protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]: repression, [Pubmed|16267290], in [regulon|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA regulon]

    • regulation

  • induced by DNA damage ([protein|search|LexA]) [Pubmed|16267290]

    • additional information

  • A [protein|search|ncRNA] is predicted between '[protein|search|yhaZ]' and '[protein|search|yhaX]' [PubMed|20525796]
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    Biological materials

    Mutant

  • MGNA-A677 (yhaZ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/677 NBRP B. subtilis, Japan]
  • BKE09810 ([gene|4873DC24E73F5677AF5C4947B21199904C3EB394|yhaZ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09810 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATAAACACCGCTTTTTC, downstream forward: _UP4_TGAGTGAATAAAAAATCCCT
  • BKK09810 ([gene|4873DC24E73F5677AF5C4947B21199904C3EB394|yhaZ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09810 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATAAACACCGCTTTTTC, downstream forward: _UP4_TGAGTGAATAAAAAATCCCT

    • References

    Reviews

  • 22933559

    • Original publications

  • 16267290,20525796,29054852