SubtiBank SubtiBank
ydfQ
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ydfQ

similar to thioredoxin
locus
BSU_05510
pI
7.22
mw
12.86 kDa
protein length
112 aa Sequence Blast
gene length
339 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.1|Electron transport and ATP synthesis] → [category|SW 2.1.4|Electron transport/ other/ based on similarity]

    • Gene

    Coordinates
    598,729 599,067

    The protein

    [SW|Domains]

  • [SW|Thioredoxin domain] (aa 1-107) (according to UniProt)

    • Structure

  • [PDB|4EUY] (from B. cereus, 34% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|43E088B93BBAA9FC58F4FF3CA00C0DDA82D23224|ydfQ]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-C170 (ydfQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2168 NBRP B. subtilis, Japan]
  • BKE05510 ([gene|43E088B93BBAA9FC58F4FF3CA00C0DDA82D23224|ydfQ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05510 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCATTTACTCCTTCAAA, downstream forward: _UP4_TAAAGGAATAAGGCAAAAAA
  • BKK05510 ([gene|43E088B93BBAA9FC58F4FF3CA00C0DDA82D23224|ydfQ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05510 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCATTTACTCCTTCAAA, downstream forward: _UP4_TAAAGGAATAAGGCAAAAAA