SubtiBank SubtiBank
ypuI
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ypuI

rRNA pseudouridine 2633 synthase
locus
BSU_23200
pI
5.49
mw
20.21 kDa
protein length
179 aa Sequence Blast
gene length
540 bp Sequence Blast
function
translation
product
rRNA pseudouridine 2633 synthase
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.2|rRNA modification and maturation]

    • Gene

    Coordinates
    2,424,654 2,425,193

    Expression and Regulation

    Operons

    genes
    [gene|8DD968C97FDC0E81293887E2FCB7EE1A9416A333|scpA]-[gene|9137D162E6331E2B127472BCF5F49A9AE46266F3|scpB]-[gene|3CC628BCF8F9F45E598060B775008B361DB2127A|ypuI]
    description
    [Pubmed|7934830]

    regulatory mechanism

  • [regulon|stringent response|stringent response]: negative regulation, in [regulon|stringent response|stringent response]

    • regulation

  • [protein|search|RelA] dependent downregulation (Class I) during stringent response [Pubmed|11948165]
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    Biological materials

    Mutant

  • MGNA-A094 (ypuI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/94 NBRP B. subtilis, Japan]
  • BKE23200 ([gene|3CC628BCF8F9F45E598060B775008B361DB2127A|ypuI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE23200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATAGCTTCTTCCTTAT, downstream forward: _UP4_TAACGTTTACTCTCCCTTTT
  • BKK23200 ([gene|3CC628BCF8F9F45E598060B775008B361DB2127A|ypuI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK23200 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATAGCTTCTTCCTTAT, downstream forward: _UP4_TAACGTTTACTCTCCCTTTT

    • References

  • 7934830