SubtiBank SubtiBank
yotM
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yotM

unknown
locus
BSU_19830
pI
10.05
mw
22.67 kDa
protein length
195 aa Sequence Blast
gene length
588 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
yodV
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]

    • Gene

    Coordinates
    2,152,265 2,152,852

    Expression and Regulation

    Operons

    genes
    [gene|AFCA823BA7245A295B3282602A928D2CD0F8CD27|yosX]-[gene|B604367A80B7D3DF4A940C12A35EDF37B0E415F2|yotB]-[gene|6416197EF316D74998012765EF9819072C38D2E2|yotC]-[gene|470037C34BD5D3EB5BDAD85BD4178ABDB6330A62|yotD]-[gene|5C8815965146BCD8ED238258B3F820AA17241165|yotE]-[gene|177BAE8E5143CBE479B8EF6814F2A1066E72D658|yotF]-[gene|CE176CE32089F79C9BAC36641DDBBA8C9C38C957|yotG]-[gene|5240CC5115326ACBB2B73F7610987C842C246F24|yotH]-[gene|ADFAFAB949F0BED0681E35C3055DB0984DA7910E|yotI]-[gene|C5508537A5CB1E2F71329CD822242EE988D395F3|yotJ]-[gene|3C740F35E67CDD7FB6BF19E0FF43F973D254EF3E|yotK]-[gene|3899DF460037B569066F452EC50AD97672AA5ACA|yotM]-[gene|46826326719EB32B5733953EC090FD91CB59C5B6|sprB]
    description
    [Pubmed|25299644]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|25299644], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]
  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|25299644], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]
  • [protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]

    • regulatory mechanism

  • [protein|6977F18870004AD236539D9409255815E6BE9241|CsoR]: repression, [Pubmed|20233928], in [regulon|6977F18870004AD236539D9409255815E6BE9241|CsoR regulon]

    • regulation

  • ''[protein|search|sprB]'': expressed during the middle and late stages of [SW|sporulation] [Pubmed|25299644]
    • view in new tab

    Biological materials

    Mutant

  • BKE19830 ([gene|3899DF460037B569066F452EC50AD97672AA5ACA|yotM]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE19830 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATCAATCACTCTCCTAAT, downstream forward: _UP4_CCTGTGAAAACGGGGGTGTA
  • BKK19830 ([gene|3899DF460037B569066F452EC50AD97672AA5ACA|yotM]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK19830 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATCAATCACTCTCCTAAT, downstream forward: _UP4_CCTGTGAAAACGGGGGTGTA

    • References

  • 25299644