SubtiBank SubtiBank
yrkL
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yrkL

similar to NAD(P)H oxidoreductase
locus
BSU_26470
pI
5.36
mw
19.95 kDa
protein length
174 aa Sequence Blast
gene length
525 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.1|Electron transport and ATP synthesis] → [category|SW 2.1.4|Electron transport/ other/ based on similarity]

    • Gene

    Coordinates
    2,708,175 2,708,699

    The protein

    Protein family

  • NAD(P)H dehydrogenase (quinone) family (with [protein|E8048E181756BCE307CF28CF31664421404748A4|YwrO] and [protein|2782BD764716CF5FAD0988284310CF75508F2286|YdeQ], according to UniProt)

    • Paralogous protein(s)

  • [protein|E8048E181756BCE307CF28CF31664421404748A4|YwrO], [protein|2782BD764716CF5FAD0988284310CF75508F2286|YdeQ]

    • Structure

  • [PDB|5LVA] (from Streptomyces violaceus, 55% identity) [pubmed|27714222]

    • Expression and Regulation

    Operons

    genes
    [gene|1BEBD09273240B6B50DABCB160FCCBC205BB2AAE|yrkK]-[gene|2EA9792C1C7CD89E43742F57FFB7300725B6AEF4|yrkL]
    description
    [pubmed|22383849]
    view in new tab

    genes
    [gene|search|yrkK ]-[gene|2EA9792C1C7CD89E43742F57FFB7300725B6AEF4|yrkL]
    description
    [pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-C505 (yrkL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2503 NBRP B. subtilis, Japan]
  • BKE26470 ([gene|2EA9792C1C7CD89E43742F57FFB7300725B6AEF4|yrkL]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE26470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGACTGATTATCCTTT, downstream forward: _UP4_TAATCCGGTATTCGCGAGGG
  • BKK26470 ([gene|2EA9792C1C7CD89E43742F57FFB7300725B6AEF4|yrkL]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK26470 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTAGACTGATTATCCTTT, downstream forward: _UP4_TAATCCGGTATTCGCGAGGG

    • References

    Research papers

  • 27714222