SubtiBank SubtiBank
ykqA
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ykqA

putative gamma-glutamylcyclotransferase
locus
BSU_14500
pI
6.22
mw
31.51 kDa
protein length
277 aa Sequence Blast
gene length
834 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
ylxU,yzaB
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    1,519,635 1,520,468

    The protein

    Protein family

  • gamma-glutamylcyclotransferase family (single member, according to UniProt)

    • Structure

  • [PDB|2QIK]

    • Expression and Regulation

    Operons

    genes
    [gene|A656321846B2E0D1F39B528E2D8B8E620CCD1148|kinC]-[gene|22DBF4D1F93519A95E6BCC0FB1AC2387DF444E27|ykqA]-[gene|15F9BF08762D28CBCD3D9748EFBD29B0D6FD7623|ktrC]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|8002614], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulatory mechanism

  • [protein|2C54FE2ADC82FF414D732018C90649D477A925AD|Spo0A]: activation, [Pubmed|8002615], in [regulon|2C54FE2ADC82FF414D732018C90649D477A925AD|Spo0A regulon]

    • regulation

  • constitutively expressed [Pubmed|12562800]
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    Biological materials

    Mutant

  • MGNA-A903 (ykqA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/903 NBRP B. subtilis, Japan]
  • BKE14500 ([gene|22DBF4D1F93519A95E6BCC0FB1AC2387DF444E27|ykqA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE14500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CGAGTTCACTTTATTTTTCT, downstream forward: _UP4_TAACACTGTAACAAAAGAAT
  • BKK14500 ([gene|22DBF4D1F93519A95E6BCC0FB1AC2387DF444E27|ykqA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK14500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CGAGTTCACTTTATTTTTCT, downstream forward: _UP4_TAACACTGTAACAAAAGAAT

    • References

  • 22383849