SubtiBank SubtiBank
yrkE
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yrkE

similar to sulfurtransferase
locus
BSU_26540
pI
5.89
mw
17.68 kDa
protein length
160 aa Sequence Blast
gene length
483 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

    • Gene

    Coordinates
    2,713,320 2,713,802

    The protein

    Structure

  • [PDB|3PNX] (from Syntrophomonas wolfei str. Goettingen, 37% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|6AD1DD074B2F044C6A4E4B98FABC4E7FD67B3139|yrzM]-[gene|8A3F1BFDF85DD96B7FB4EBC807F71639AF69DE98|yrkD]-[gene|1F1FE531622CD218EE8990CDAC6D2D2F9E86FE3F|yrkE]-[gene|5FC3DF596816AA4E8541B324EC6DE6D89C90C8E2|yrkF]-[gene|06CC915A18E5ADD42B784B7BBBFD4C344559A34E|yrkH]-[gene|D996F581E21395C3F9CC064800C49A765EFC17A7|yrkI]-[gene|F3E842844B315FE438F66995CDFB8BA1C32BDF23|yrkJ]-[gene|1BEBD09273240B6B50DABCB160FCCBC205BB2AAE|yrkK]-[gene|search|yrkM]
    description
    [Pubmed|22383849]
    view in new tab

    genes
    [gene|6AD1DD074B2F044C6A4E4B98FABC4E7FD67B3139|yrzM]-[gene|8A3F1BFDF85DD96B7FB4EBC807F71639AF69DE98|yrkD]-[gene|1F1FE531622CD218EE8990CDAC6D2D2F9E86FE3F|yrkE]-[gene|5FC3DF596816AA4E8541B324EC6DE6D89C90C8E2|yrkF]-[gene|06CC915A18E5ADD42B784B7BBBFD4C344559A34E|yrkH]-[gene|D996F581E21395C3F9CC064800C49A765EFC17A7|yrkI]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-C454 (yrkE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2452 NBRP B. subtilis, Japan]
  • BKE26540 ([gene|1F1FE531622CD218EE8990CDAC6D2D2F9E86FE3F|yrkE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE26540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTATTCTCCTAACTA, downstream forward: _UP4_TAATGTTACTCATTTACTCA
  • BKK26540 ([gene|1F1FE531622CD218EE8990CDAC6D2D2F9E86FE3F|yrkE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK26540 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTTATTCTCCTAACTA, downstream forward: _UP4_TAATGTTACTCATTTACTCA