SubtiBank SubtiBank
yqfZ [2019-08-26 09:02:01]
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yqfZ [2019-08-26 09:02:01]

unknown
locus
BSU_25060
pI
8.09
mw
10.63 kDa
protein length
99 aa Sequence Blast
gene length
300 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]

    • Gene

    Coordinates
    2,588,701 2,589,000

    The protein

    [SW|Domains]

  • contains a N-acetylglucosamine-polymer-binding [SW|LysM domain] [Pubmed|18430080]

    • Expression and Regulation

    Operons

    genes
    [gene|144A8B3F5E534F3FD6EFC1E9A5ED650E09DCE885|yqfZ]-[gene|4992F5C2ED7DE37C08D5715F7E8851F5FDB51059|ispG]
    description
    [Pubmed|12662922]

    sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|12662922], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]

    • regulatory mechanism

  • [protein|90DCE4F286D2C151D8BDBF0E024E6BBEC94E2397|SpoIIID]: repression, [Pubmed|15383836], in [regulon|90DCE4F286D2C151D8BDBF0E024E6BBEC94E2397|SpoIIID regulon]

    • regulation

  • expressed early during sporulation in the mother cell ([protein|search|SigE], [SW|SpoIIID]) [Pubmed|12662922,15383836]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-C488 (yqfZ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2486 NBRP B. subtilis, Japan]
  • BKE25060 ([gene|144A8B3F5E534F3FD6EFC1E9A5ED650E09DCE885|yqfZ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE25060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGCTTTTCCTCCCGCAT, downstream forward: _UP4_TAATTTAACGTTAATTTCTT
  • BKK25060 ([gene|144A8B3F5E534F3FD6EFC1E9A5ED650E09DCE885|yqfZ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK25060 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGCTTTTCCTCCCGCAT, downstream forward: _UP4_TAATTTAACGTTAATTTCTT

    • References

    Reviews

  • 18430080

    • Original publications

  • 12662922,15383836