SubtiBank SubtiBank
ybfI
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ybfI

similar to transcription factor ([SW|AraC family])
locus
BSU_02220
pI
6.10
mw
32.29 kDa
protein length
275 aa Sequence Blast
gene length
828 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    242,834 243,661

    The protein

    Protein family

  • [SW|AraC family]

    • [SW|Domains]

  • [SW|HTH araC/xylS-type domain] (aa 171-268) (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|0AD208CFDA10F7BED022583C8448EFA7E37B9E33|ybfI]-[gene|5084B6223B9F261E9FE1C65CD3F5FE20AF7E5ECE|ybfH]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B970 (ybfI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1969 NBRP B. subtilis, Japan]
  • BKE02220 ([gene|0AD208CFDA10F7BED022583C8448EFA7E37B9E33|ybfI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE02220 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGGGATGCCTCCTGTCGG, downstream forward: _UP4_ATTTTTGAAAAGGAGCTTCA
  • BKK02220 ([gene|0AD208CFDA10F7BED022583C8448EFA7E37B9E33|ybfI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK02220 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGGGATGCCTCCTGTCGG, downstream forward: _UP4_ATTTTTGAAAAGGAGCTTCA

    • References

  • 23504016