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yueB [2019-01-31 17:17:43]
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yueB [2019-01-31 17:17:43]

membrane protein, part of the type VII protein secretion system YukD-YukC-YukB-YueB-YueC, receptor for phage SPPI
locus
BSU31860
pI
4.30
mw
119.77 kDa
protein length
1076 aa Sequence Blast
gene length
3231 bp Sequence Blast
function
export of YukE
product
part of the type VII protein secretion system, receptor for phage SPPI
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.5|Protein secretion]
  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.6|Phage-related functions]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,266,687 3,269,917

    Phenotypes of a mutant

  • resistance to phage SPPI [Pubmed|15576783]
  • loss of secretion of [protein|50D2A03E2D7B5D461540FD157377E0D37F771888|YukE] [Pubmed|24798022]

    • The protein

    Catalyzed reaction/ biological activity

  • receptor for phage SPP1 [Pubmed|15576783]
  • required for depolarization of the cytoplasmic membrane upon binding of phage SPP1 [Pubmed|22154073]

    • [SW|Localization]

  • cell membrane [Pubmed|15576783,23861817], localizes preferentially to the cell poles [Pubmed|21705600]
  • exposed to the surface [Pubmed|16481324]
  • cytoplasm (homogeneous) [Pubmed|16479537]

    • Expression and Regulation

    Operons

    genes
    [gene|50D2A03E2D7B5D461540FD157377E0D37F771888|yukE]-[gene|3CC3E197848E9688413C15CEA7DDCF0A7120A920|yukD]-[gene|3FE4A91C7D0B43C8704391F2F9493852B3AED9B0|yukC]-[gene|6007664F3D979B4D8D4662C7F6E5CF2F489268E3|yukB]-[gene|0A38B2E900532C9950DE6E629F5EB21D64E18B55|yueB]-[gene|DA52C4CD130F32734E01A52F2F395127D2260F61|yueC]-[gene|B258CA26B0EC2310475FCCD67F1F196857FC0004|yueD]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|22383849], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]

    • regulatory mechanism

  • [protein|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU]: activation, [protein|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU]-P, [Pubmed|23861817], in [regulon|D343D2096664A972026D911E7A17A35C7B1CD1C9|DegU regulon]

    • regulation

  • expressed in the stationary phase [Pubmed|23861817]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-A649 (yueB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/649 NBRP B. subtilis, Japan]
  • BKE31860 ([gene|0A38B2E900532C9950DE6E629F5EB21D64E18B55|yueB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE31860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GATCAAGCTTTTTCGTTGTT, downstream forward: _UP4_TGATCGCAGCATGGAAAAGG
  • BKK31860 ([gene|0A38B2E900532C9950DE6E629F5EB21D64E18B55|yueB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK31860 BGSC], [Pubmed|28189581], upstream reverse: _UP1_GATCAAGCTTTTTCGTTGTT, downstream forward: _UP4_TGATCGCAGCATGGAAAAGG

    • References

    Reviews

  • 19155186,11973144

    • Original publications

  • 16479537,16481324,15576783,21630458,18487323,17611601,22383849,22171743,21705600,22154073,23861817,24798022,27179995