SubtiBank SubtiBank
amyD [Tue Dec 13 2016 11:16:35 GMT+0100 (CET)]
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amyD [Tue Dec 13 2016 11:16:35 GMT+0100 (CET)]

probably ABC transporter for melibiose (permease)
locus
BSU30280
pI
9.08
mw
34.00 kDa
function
probably melibiose uptake
product
ABC transporter (permease)
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.1|Importers] → [category|SW 1.2.1.1.1|Uptake of carbon sources]
  • [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.21|Utilization of melibiose]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [SW|Categories] containing this gene/protein

  • [SW|ABC transporters], [SW|utilization of specific carbon sources], [SW|membrane proteins], [SW|sporulation proteins]
  • This gene is a member of the following [SW|regulons]

  • [SW|CcpA regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    3,099,123 -> 3,100,034

    The protein

    [SW|Localization]

  • cell membrane [Pubmed|10092453]
  • [SW|Interactions]

  • ([protein|search|AmyC]-[protein|search|AmyD])-[protein|search|MsmE] [Pubmed|10092453]
  • Expression and Regulation

    Operon

  • ''[protein|search|msmR]-[protein|search|msmE]-[protein|search|amyD]-[protein|search|amyC]-[protein|search|melA]'' [Pubmed|22383849]
  • ''[protein|search|msmE]-[protein|search|amyD]-[protein|search|amyC]-[protein|search|melA]'' [Pubmed|22383849]
  • [SW|Sigma factor]

  • ''[protein|search|msmR]'': [protein|search|SigA] [Pubmed|22900538]
  • Regulation

  • [protein|search|MsmR]
  • repressed by glucose ([protein|search|CcpA]) [Pubmed|22900538]
  • Regulatory mechanism

  • [protein|search|CcpA]: transcription repression [Pubmed|22900538]
  • References

  • 10092453,22383849,22900538